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we embrace change

we embrace change
Newer Posts Page 2 of 2

Digital evolution: Avida as a software platform for studying evolution in action.

Miguel A. Fortuna on Our research, Our computational toolbox | 20 Apr 2020

Digital evolution is a form of evolutionary computation in which self-replicating computer programs—digital organisms—evolve within a user-defined computational environment. Avida is the most widely used software platform for research in digital evolution.…

Neo4j graph databases: working from Jupyterlab.

Miguel A. Fortuna on Setting up our lab, Our computational toolbox | 13 Apr 2020

Neo4j is a graph database that uses graph structures for semantic queries with nodes, edges, and properties to represent and store data. We will briefly describe the open source packages, written in Python and R, that we use in our lab to connect Neo4j databases from our JupyterLab server.…

JupyterLab extensions: LaTeX.

Miguel A. Fortuna on Setting up our lab, Our computational toolbox | 06 Apr 2020

The LaTex extension for JupyterLab allows for live-editing of LaTeX documents.…

JupyterLab extensions: GitLab.

Miguel A. Fortuna on Setting up our lab, Our computational toolbox | 30 Mar 2020

The JupyterLab GitLab extension allows lab members to select GitLab organizations and users, browse their repositories, and open the files in those repositories. If those files are notebooks, we can run them just as you would any other notebook.…

JupyterLab extensions: GitHub.

Miguel A. Fortuna on Setting up our lab, Our computational toolbox | 23 Mar 2020

The JupyterLab GitHub extension allows lab members to select GitHub organizations and users, browse their repositories, and open the files in those repositories. If those files are notebooks, we can run them just as you would any other notebook.…

JupyterLab extensions: Git as a Version Control System.

Miguel A. Fortuna on Setting up our lab, Our computational toolbox | 16 Mar 2020

Git, as a version control system, allows lab members to revert and go back to an older version of the code. Moreover, sometimes multiple members are working in parallel on the same code, so Git is needed to ensure there are no code conflicts between them.…

JupyterLab: getting your work done from anywhere.

Miguel A. Fortuna on Setting up our lab, Our computational toolbox | 09 Mar 2020

JupyterLab is a web-based interactive development environment for Jupyter notebooks, code, and data. By deploying it with JupyterHub in our server, lab members can work from the office, home or their favorite coffee shop, using a desktop computer, laptop, tablet or smartphone.…

Nextcloud: getting your data stored safely in your own cloud.

Miguel A. Fortuna on Setting up our lab, Our computational toolbox | 02 Mar 2020

Nextcloud allows your lab members to have all their files always accessible via the Internet, from wherever they are, and share them with their colleagues.…

Working in the cloud.

Miguel A. Fortuna on Setting up our lab | 27 Feb 2020

In our lab we do things differently. We work in the cloud. This means the data and the applications you need to analyze them are available anytime from anywhere.…

Welcome to our lab.

Miguel A. Fortuna on Our research | 24 Feb 2020

Our computational biology lab focuses on harnessing evolution by engineering species interactions to help fight human diseases.…

Newer Posts Page 2 of 2
fortunalab: we embrace change Miguel A. Fortuna